Plastid Proteomic Analysis in Tomato Fruit Development
Identifieur interne : 000494 ( Main/Exploration ); précédent : 000493; suivant : 000495Plastid Proteomic Analysis in Tomato Fruit Development
Auteurs : Miho Suzuki [Japon] ; Sachiko Takahashi [Japon] ; Takanori Kondo [Japon] ; Hideo Dohra [Japon] ; Yumihiko Ito [Japon] ; Yoshikazu Kiriiwa [Japon] ; Marina Hayashi [Japon] ; Shiori Kamiya [Japon] ; Masaya Kato [Japon] ; Masayuki Fujiwara [Japon] ; Yoichiro Fukao [Japon] ; Megumi Kobayashi [Japon] ; Noriko Nagata [Japon] ; Reiko Motohashi [Japon]Source :
- PLoS ONE [ 1932-6203 ] ; 2015.
Abstract
To better understand the mechanism of plastid differentiation from chloroplast to chromoplast, we examined proteome and plastid changes over four distinct developmental stages of ‘Micro-Tom’ fruit. Additionally, to discover more about the relationship between fruit color and plastid differentiation, we also analyzed and compared ‘Micro-Tom’ results with those from two other varieties, ‘Black’ and ‘White Beauty’. We confirmed that proteins related to photosynthesis remain through the orange maturity stage of ‘Micro-Tom’, and also learned that thylakoids no longer exist at this stage. These results suggest that at a minimum there are changes in plastid morphology occurring before all related proteins change. We also compared ‘Micro-Tom’ fruits with ‘Black’ and ‘White Beauty’ using two-dimensional gel electrophoresis. We found a decrease of CHRC (plastid-lipid-associated protein) and HrBP1 (harpin binding protein-1) in the ‘Black’ and ‘White Beauty’ varieties. CHRC is involved in carotenoid accumulation and stabilization. HrBP1 in
Url:
DOI: 10.1371/journal.pone.0137266
PubMed: 26371478
PubMed Central: 4570674
Affiliations:
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Nara Institute of Science and Technology, Ikoma city, Nara, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara</wicri:regionArea><wicri:noRegion>Nara</wicri:noRegion></affiliation></author><author><name sortKey="Fukao, Yoichiro" sort="Fukao, Yoichiro" uniqKey="Fukao Y" first="Yoichiro" last="Fukao">Yoichiro Fukao</name><affiliation wicri:level="1"><nlm:aff id="aff003"><addr-line>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara</wicri:regionArea><wicri:noRegion>Nara</wicri:noRegion></affiliation></author><author><name sortKey="Kobayashi, Megumi" sort="Kobayashi, Megumi" uniqKey="Kobayashi M" first="Megumi" last="Kobayashi">Megumi 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Takahashi</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Kondo, Takanori" sort="Kondo, Takanori" uniqKey="Kondo T" first="Takanori" last="Kondo">Takanori Kondo</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Dohra, Hideo" sort="Dohra, Hideo" uniqKey="Dohra H" first="Hideo" last="Dohra">Hideo Dohra</name><affiliation wicri:level="1"><nlm:aff id="aff002"><addr-line>Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Ito, Yumihiko" sort="Ito, Yumihiko" uniqKey="Ito Y" first="Yumihiko" last="Ito">Yumihiko Ito</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Kiriiwa, Yoshikazu" sort="Kiriiwa, Yoshikazu" uniqKey="Kiriiwa Y" first="Yoshikazu" last="Kiriiwa">Yoshikazu Kiriiwa</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Hayashi, Marina" sort="Hayashi, Marina" uniqKey="Hayashi M" first="Marina" last="Hayashi">Marina Hayashi</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Kamiya, Shiori" sort="Kamiya, Shiori" uniqKey="Kamiya S" first="Shiori" last="Kamiya">Shiori Kamiya</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Kato, Masaya" sort="Kato, Masaya" uniqKey="Kato M" first="Masaya" last="Kato">Masaya Kato</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author><author><name sortKey="Fujiwara, Masayuki" sort="Fujiwara, Masayuki" uniqKey="Fujiwara M" first="Masayuki" last="Fujiwara">Masayuki Fujiwara</name><affiliation wicri:level="1"><nlm:aff id="aff003"><addr-line>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara</wicri:regionArea><wicri:noRegion>Nara</wicri:noRegion></affiliation></author><author><name sortKey="Fukao, Yoichiro" sort="Fukao, Yoichiro" uniqKey="Fukao Y" first="Yoichiro" last="Fukao">Yoichiro Fukao</name><affiliation wicri:level="1"><nlm:aff id="aff003"><addr-line>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara</wicri:regionArea><wicri:noRegion>Nara</wicri:noRegion></affiliation></author><author><name sortKey="Kobayashi, Megumi" sort="Kobayashi, Megumi" uniqKey="Kobayashi M" first="Megumi" last="Kobayashi">Megumi Kobayashi</name><affiliation wicri:level="3"><nlm:aff id="aff004"><addr-line>Faculty of Science, Japan Woman’s University, Bunkyo-ku, Tokyo, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Science, Japan Woman’s University, Bunkyo-ku, Tokyo</wicri:regionArea><placeName><settlement type="city">Tokyo</settlement></placeName></affiliation></author><author><name sortKey="Nagata, Noriko" sort="Nagata, Noriko" uniqKey="Nagata N" first="Noriko" last="Nagata">Noriko Nagata</name><affiliation wicri:level="3"><nlm:aff id="aff004"><addr-line>Faculty of Science, Japan Woman’s University, Bunkyo-ku, Tokyo, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Science, Japan Woman’s University, Bunkyo-ku, Tokyo</wicri:regionArea><placeName><settlement type="city">Tokyo</settlement></placeName></affiliation></author><author><name sortKey="Motohashi, Reiko" sort="Motohashi, Reiko" uniqKey="Motohashi R" first="Reiko" last="Motohashi">Reiko Motohashi</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka</wicri:regionArea><wicri:noRegion>Shizuoka</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>To better understand the mechanism of plastid differentiation from chloroplast to chromoplast, we examined proteome and plastid changes over four distinct developmental stages of ‘Micro-Tom’ fruit. Additionally, to discover more about the relationship between fruit color and plastid differentiation, we also analyzed and compared ‘Micro-Tom’ results with those from two other varieties, ‘Black’ and ‘White Beauty’. We confirmed that proteins related to photosynthesis remain through the orange maturity stage of ‘Micro-Tom’, and also learned that thylakoids no longer exist at this stage. These results suggest that at a minimum there are changes in plastid morphology occurring before all related proteins change. We also compared ‘Micro-Tom’ fruits with ‘Black’ and ‘White Beauty’ using two-dimensional gel electrophoresis. We found a decrease of CHRC (plastid-lipid-associated protein) and HrBP1 (harpin binding protein-1) in the ‘Black’ and ‘White Beauty’ varieties. CHRC is involved in carotenoid accumulation and stabilization. HrBP1 in <italic>Arabidopsis</italic> has a sequence similar to proteins in the PAP/fibrillin family. These proteins have characteristics and functions similar to lipocalin, an example of which is the transport of hydrophobic molecules. We detected spots of TIL (temperature-induced lipocalin) in 2D-PAGE results, however the number of spots and their isoelectric points differed between ‘Micro-Tom’ and ‘Black’/‘White Beauty’. Lipocalin has various functions including those related to environmental stress response, apoptosis induction, membrane formation and fixation, regulation of immune response, cell growth, and metabolism adjustment. Lipocalin related proteins such as TIL and HrBP1 could be related to the accumulation of carotenoids, fruit color and the differentiation of chromoplast.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Joyard, J" uniqKey="Joyard J">J Joyard</name></author><author><name sortKey="Ferro, M" uniqKey="Ferro M">M Ferro</name></author><author><name sortKey="Masselon, C" uniqKey="Masselon C">C Masselon</name></author><author><name sortKey="Seigneurin Berny, D" uniqKey="Seigneurin Berny D">D Seigneurin-Berny</name></author><author><name sortKey="Salvi, D" uniqKey="Salvi D">D Salvi</name></author><author><name sortKey="Garin, J" uniqKey="Garin J">J Garin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ferro, M" uniqKey="Ferro M">M Ferro</name></author><author><name sortKey="Brugiere, S" uniqKey="Brugiere S">S Brugière</name></author><author><name sortKey="Salvi, D" uniqKey="Salvi D">D 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Bennett</name></author><author><name sortKey="Mansfield, Jw" uniqKey="Mansfield J">JW Mansfield</name></author><author><name sortKey="Grant, M" uniqKey="Grant M">M Grant</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Simkin, Aj" uniqKey="Simkin A">AJ Simkin</name></author><author><name sortKey="Gaffe, J" uniqKey="Gaffe J">J Gaffé</name></author><author><name sortKey="Alcaraz, Jp" uniqKey="Alcaraz J">JP Alcaraz</name></author><author><name sortKey="Carde, Jp" uniqKey="Carde J">JP Carde</name></author><author><name sortKey="Bramley, Pm" uniqKey="Bramley P">PM Bramley</name></author><author><name sortKey="Fraser, Pd" uniqKey="Fraser P">PD Fraser</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="You, J" uniqKey="You J">J You</name></author><author><name sortKey="Fitzgerald, A" uniqKey="Fitzgerald A">A Fitzgerald</name></author><author><name sortKey="Cozzi, Pj" uniqKey="Cozzi P">PJ Cozzi</name></author><author><name sortKey="Zhao, Z" uniqKey="Zhao Z">Z Zhao</name></author><author><name sortKey="Graham, P" uniqKey="Graham P">P Graham</name></author><author><name sortKey="Russell, Pj" uniqKey="Russell P">PJ Russell</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Japon</li></country><settlement><li>Tokyo</li></settlement></list><tree><country name="Japon"><noRegion><name sortKey="Suzuki, Miho" sort="Suzuki, Miho" uniqKey="Suzuki M" first="Miho" last="Suzuki">Miho Suzuki</name></noRegion><name sortKey="Dohra, Hideo" sort="Dohra, Hideo" uniqKey="Dohra H" first="Hideo" last="Dohra">Hideo Dohra</name><name sortKey="Fujiwara, Masayuki" sort="Fujiwara, Masayuki" uniqKey="Fujiwara M" first="Masayuki" last="Fujiwara">Masayuki Fujiwara</name><name sortKey="Fukao, Yoichiro" sort="Fukao, Yoichiro" uniqKey="Fukao Y" first="Yoichiro" last="Fukao">Yoichiro Fukao</name><name sortKey="Hayashi, Marina" sort="Hayashi, Marina" uniqKey="Hayashi M" first="Marina" last="Hayashi">Marina Hayashi</name><name sortKey="Ito, Yumihiko" sort="Ito, Yumihiko" uniqKey="Ito Y" first="Yumihiko" last="Ito">Yumihiko Ito</name><name sortKey="Kamiya, Shiori" sort="Kamiya, Shiori" uniqKey="Kamiya S" first="Shiori" last="Kamiya">Shiori Kamiya</name><name sortKey="Kato, Masaya" sort="Kato, Masaya" uniqKey="Kato M" first="Masaya" last="Kato">Masaya Kato</name><name sortKey="Kiriiwa, Yoshikazu" sort="Kiriiwa, Yoshikazu" uniqKey="Kiriiwa Y" first="Yoshikazu" last="Kiriiwa">Yoshikazu Kiriiwa</name><name sortKey="Kobayashi, Megumi" sort="Kobayashi, Megumi" uniqKey="Kobayashi M" first="Megumi" last="Kobayashi">Megumi Kobayashi</name><name sortKey="Kondo, Takanori" sort="Kondo, Takanori" uniqKey="Kondo T" first="Takanori" last="Kondo">Takanori Kondo</name><name sortKey="Motohashi, Reiko" sort="Motohashi, Reiko" uniqKey="Motohashi R" first="Reiko" last="Motohashi">Reiko Motohashi</name><name sortKey="Nagata, Noriko" sort="Nagata, Noriko" uniqKey="Nagata N" first="Noriko" last="Nagata">Noriko Nagata</name><name sortKey="Takahashi, Sachiko" sort="Takahashi, Sachiko" uniqKey="Takahashi S" first="Sachiko" last="Takahashi">Sachiko Takahashi</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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